This project aims to make progress the first version of genephylo.
We welcome contributors at any level of experience.
Goal
Add new features to the pipeline, develop the corresponding nf-core modules and deliver a first working version of the pipeline.
Tasks
- Write module for macse refineAlignment and implement to pipeline
- Write module for treerecs and implement to pipeline
- Implement ORF detection
- Extract and convert relevant sections of multiplesequencealign as a subworkflow
- Integrate subworkflow into the pipeline
Where
In-person (Okinawa hub) and online.
location
Okinawa and online
category
pipelines
